Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913548.1_cds_XP_016463609.1_56717
CDS Infomation

[gene=LOC107786611] [db_xref=GeneID:107786611] [protein=transmembrane protein 53-like] [protein_id=XP_016463609.1] [location=complement(join(14547..14817,15074..15279,15825..15930,16037..16767))] [gbkey=CDS]
Sequence

ATGGCTTCGTTTTCTGGAATCCTCCAAAGACCGATAGTTGCAGCATCTGCAGTCGCTATA
ACTTCTGTATCTACTGATCTTCATGAAAAATTTTGGCCCTCAAAATCAATAGAGAATTCT
TCTTCTGAAGCATTGCAAGAAAAGAAAACATCATGGGTGTCTCAGATATCCGTATCTAAG
CTTGCCAATTTGTCCTTTGTCAACAGAATACGCGTTCCTGTGCCTAACATAAGTGTTCCA
AGTCCCAGCGCCAGTTACAGTTCTAGTTCTGTTTCAAATCTTTCGTGTTCTTCCATAGGA
ATTTCTTCTGTGTTGGTCAATTTTTATCAATTAGCAGCATTGACTAAGTCTGCAAATCCA
TCAACATATACTTCTACAGTTCCTTCTTCGCCTTCAGAGGTGTTGTATAAATGGCATTTA
CCGGAGCCAAATGTTGTTGATATATCAGGGAATTATGATTGTTCATCAGTAAAGTCTAGG
ACTGTGGTAGTATTGTTGGGATGGTTAGGTGCAAAACAGAAGCATCTAAAGAGATATGCA
GACTGGTATTCCTCAAGAGGATATCATGTCATTACATTTACTTTCCCAATGTCTGAGATT
CTTAGCTATCAAGTCGGGGGAAAGGCAGAGCAGGATATAGAACTGCTTGTGAACCATCTT
GCTGATTGGTTGGAAGAAGAGCATGGAAAGAACTTGGTCTTCCACACTTTCAGTAACACA
GGATGGTTAACTTATGGTGTCATTTTGGAGAAGTTTCAAAAACAAGATCCTGCTTTAATG
ACAAGGATCAAAGGTTGTATTGTTGATTCTGCTCCTGTAGCTGCTCCAGATCCACAGGTA
TGGGCTTCTGGATTCTCTGCTGCCTTTTTGAAGAAGAATAGTGTTGCAACCAAACGCATC
ATGACTATAAACAACAAAGATGCGGATGTGACAATAGAAACCAAAACTTCTTCGGATGCT
ACGCCTGCAGTAACTGAAGCAGCTTTGCTAGTAGTACTGGAGAAGTTCTTTGAGGTGGTT
TTGAACCTTCCCGCCGTAAATAGGAGACTTTCTGATGTTCTGGATCTATTGACATCCCGG
CAACCAAGTTGCCCACAATTGTACATATACAGCAGTGCAGACAGAGTGATTCCTGCGATT
TCTGTTGAGTCCTTTGTAGAGGAGCAACGAAGCATTGGTCGCAACGTTAGAGCTTGCAAC
TTCATTTCTACACCTCATGTTGATCATTTCAGAAATGATCCTGAATTATATACTTTACAG
CTTACCCAATTTCTTGAGGACTCCGTTTTAAGCTCTTGCAAACAGTCTTCCTGA

Peptide Sequence

PEP ID

XP_016463609.1
PEP Infomation

PREDICTED: transmembrane protein 53-like [Nicotiana tabacum]
Sequence

MASFSGILQRPIVAASAVAITSVSTDLHEKFWPSKSIENSSSEALQEKKTSWVSQISVSK
LANLSFVNRIRVPVPNISVPSPSASYSSSSVSNLSCSSIGISSVLVNFYQLAALTKSANP
STYTSTVPSSPSEVLYKWHLPEPNVVDISGNYDCSSVKSRTVVVLLGWLGAKQKHLKRYA
DWYSSRGYHVITFTFPMSEILSYQVGGKAEQDIELLVNHLADWLEEEHGKNLVFHTFSNT
GWLTYGVILEKFQKQDPALMTRIKGCIVDSAPVAAPDPQVWASGFSAAFLKKNSVATKRI
MTINNKDADVTIETKTSSDATPAVTEAALLVVLEKFFEVVLNLPAVNRRLSDVLDLLTSR
QPSCPQLYIYSSADRVIPAISVESFVEEQRSIGRNVRACNFISTPHVDHFRNDPELYTLQ
LTQFLEDSVLSSCKQSS

Transcript Sequence

Gene sequence data has not been registered.